Author Archive

Scholarly publishers and their high profits

Posted in Open Access on March 25, 2014 by telescoper

Lest we forget the Great Academic Publishing Ripoff…

 

 

Alex O. Holcombe's avatarAlex Holcombe's blog

I recently published the below chart to document the outrageous profit margins of scholarly publishers in the sciences.

Screen Shot 2013-01-09 at 12.35.26 PM

This post is to provide the sources for the numbers in the chart.

The Woolworths number comes from their website, where they write “As a group, Woolworths Limited makes less than seven cents in the dollar before we then pay interest and tax”.

The Rio Tinto figure of 23% is based on the operating profit they report divided by the consolidated sales revenue in their 2011 financial summary.

Apple’s profit of 35% is based on these numbers, dividing their operating income for the year ending September 2012 of 55.2 billion by the revenue for the same period of 156.5 billion.

The 34% number for Springer comes from Heather Morrison’s PhD thesis, in which she writes that “Springer’s Science + Business Media (2010) reported a return on sales (operating profit)…

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Responding to the Mail

Posted in The Universe and Stuff with tags , , , , on March 24, 2014 by telescoper

What was that quotation by Oscar Wilde, “We are all in the gutter, but some of us aren’t reading the Daily Mail“? Last week that particular element of the gutter press took the opportunity to display its aptitude for racism and sexism in a snide piece about the appearance of two female (shock!) and non-white (horror!) scientists on Newsnight. It’s not really a surprise that the Daily Mail would publish such a scummy article, but it’s still depressing to see how the minds of some people work.

For the record I’ll say that I only know one of the scientists concerned personally (Hiranya Peiris of University College, London). Speaking as a cosmologist, I’m sure I’m not alone in saying that if someone from the press had phoned me up and asked me to suggest an expert to invite onto a television show to explain the BICEP2 results then Hiranya would have been right at the top of my list – because  she’s a brilliant scientist (in exactly the relevant area) and a gifted communicator to boot. Is it really so hard to grasp the idea that a brilliant scientist can be female? Or born in Sri Lanka?

Anyway, University College was quick to criticize the Daily Fail in an open letter from Professor David Price, Vice-Provost for Research. Meanwhile a flurry of enraged emails was going around the Council of the Royal Astronomical Society (of which I am a member) that led to a collective response being issued on Friday.

Here follows the RAS statement on the matter which I reproduce here in full, apart from the link to the offensive Daily Mail “article” which I have removed because I don’t want them to profit from traffic sent by this blog.

The statement was written by RAS President David Southwood and RAS Press Officer Robert Massey who are to be congratulated for their measured yet forceful riposte. The last two paragraphs are particularly good.

I’m glad the task of responding to the Daily Mail wasn’t left to me. I would have been far less diplomatic.

–0–

The Council and President of the Royal Astronomical Society (RAS) have offered unequivocal support to astronomers Dr Hiranya Peiris and Dr Maggie Aderin-Pocock. An article in the Daily Mail suggested that they were selected to appear on an episode of theBBC Newsnight programme on the basis of their ethnic background, nationality and gender.

The two astronomers discussed results from the BICEP-2 experiment announced earlier this week, which offered evidence of gravitational waves in the early universe and for a rapid expansion of the cosmos (known as inflation) shortly after the Big Bang. If confirmed, this discovery is of huge significance and was rightly covered by news media all over the world.

Dr Peiris is a world-leading cosmologist now based at University College London (UCL), with degrees from Cambridge and Princeton. In 2012 she received the RAS Fowler Award in recognition of her immense contribution to her field at an early stage of her research career.

Dr Aderin-Pocock has a background in space engineering and science communication and is now co-presenter of theBBC’s The Sky at Night, a role which demands the ability to convey complex ideas to the public at large.

Both scientists are thus exceptionally well qualified to discuss the BICEP-2 results and were natural choices for the Newsnight piece.

In the Daily Mail article, columnist ‘Ephraim Hardcastle’ (the nom de plume of Peter Mackay) not only ignored their expertise entirely but incorrectly suggested that the BICEP-2 team consisted only of white, male, American astronomers.

Astronomy world-wide has long ceased to be a closed male world and the backgrounds of astronomers have long been culturally diverse. Specifically in Britain, women now make up 27% of UK university lecturers in astronomy [see e.g. the pdfRAS Demographic Survey (2011)] and lead space- and ground-based research projects alike.

RAS President Prof. David Southwood commented: “Astronomy did not begin in Western Europe and has always been an international science. Today researchers from many nations and many cultures routinely work together to achieve shared goals. In the UK, our field is enriched by some of the most talented people from all over the world who choose to join teams in this country.

“It is deeply regrettable that the Daily Mail column chose to overlook the scientific achievements of the BICEP-2 team and the expertise of Hiranya and Maggie and instead concentrate on their skin colour and gender. The implied and deplorable message  that astronomy is the exclusive business of people who are white and male  completely ignores the successful efforts made by the RAS and other scientific bodies to create an environment where science can be done by those best suited to do it, irrespective of background culture, nationality or gender.”

Clover: What Might Have Been

Posted in Science Politics, The Universe and Stuff with tags , , , on March 23, 2014 by telescoper

Quite a few people have been asking me whether the UK’s cancelled B-mode experiment, Clover, could have detected what BICEP2 may  have found; I’m still not convinced, by the way. It therefore seemed apt to do a quick post in order to direct you to relevant sources of information. If you’re interested in Clover’s capabilities you can find a nice summary on the ArXiv here. The abstract reads:

We describe the objectives, design and predicted performance of Clover, which is a ground-based experiment to measure the faint “B-mode” polarisation pattern in the cosmic microwave background (CMB). To achieve this goal, clover will make polarimetric observations of approximately 1000 deg^2 of the sky in spectral bands centred on 97, 150 and 225 GHz. The observations will be made with a two-mirror compact range antenna fed by profiled corrugated horns. The telescope beam sizes for each band are 7.5, 5.5 and 5.5 arcmin, respectively. The polarisation of the sky will be measured with a rotating half-wave plate and stationary analyser, which will be an orthomode transducer. The sky coverage combined with the angular resolution will allow us to measure the angular power spectra between 20 < l < 1000. Each frequency band will employ 192 single polarisation, photon noise limited TES bolometers cooled to 100 mK. The background-limited sensitivity of these detector arrays will allow us to constrain the tensor-to-scalar ratio to 0.026 at 3sigma, assuming any polarised foreground signals can be subtracted with minimal degradation to the 150 GHz sensitivity. Systematic errors will be mitigated by modulating the polarisation of the sky signals with the rotating half-wave plate, fast azimuth scans and periodic telescope rotations about its boresight. The three spectral bands will be divided into two separate but nearly identical instruments – one for 97 GHz and another for 150 and 225 GHz. The two instruments will be sited on identical three-axis mounts in the Atacama Desert in Chile near Pampa la Bola. Observations are expected to begin in late 2009.

The following points, gleaned from a very quick skimming of the above paper, are worth noting (but please note the important corrections and clarifications in the comments below from the first author of the above paper and also bear in mind that the Clover numbers are estimated rather than based on actual measurements):

  1. The sky coverage of Clover would have been 1000 square degrees, compared with 380 square degrees of BICEP2
  2. Clover measurements would have been made at three frequencies, 97 GHz, 150 GHz and 225 GHz. This would have enabled the possibility of foreground contamination to be rejected with much greater confidence than in BICEP2 (which only operates at 150 GHz)
  3. The sensitivity of Clover at 150 GHz (the frequency at which BICEP2 operates) would have been about 1.4 times better than BICEP2
  4. Had it gone ahead, Clover would have started taking data at around the same time as BICEP2 (perhaps even a bit earlier).
  5. Clover was originally intended to be positioned at the South Pole, where observing conditions are better than in Chile and where BICEP2 is placed, but this was in the middle of STFC’s financial crisis and running costs would have been much higher than the alternative location in Chile. This might have had a negative impact on its sensitivity.

Here’s a plot from the above paper showing a the anticipated measurement if the tensor scalar ratio had been 0.1; BICEP2 detection (if real) corresponds to a signal twice this amplitude:

Clover_sensitivity

In other words, we don’t know whether Clover would have hit its target sensitivity and there are many other imponderables, but  it’s a very great shame it never got the chance to try…

Spring Rain

Posted in Poetry with tags , , on March 22, 2014 by telescoper

I thought I had forgotten,
But it all came back again
To-night with the first spring thunder
In a rush of rain.

I remembered a darkened doorway
Where we stood while the storm swept by,
Thunder gripping the earth
And lightning scrawled on the sky.

The passing motor busses swayed,
For the street was a river of rain,
Lashed into little golden waves
In the lamp light’s stain.

With the wild spring rain and thunder
My heart was wild and gay;
Your eyes said more to me that night
Than your lips would ever say. . . .

I thought I had forgotten,
But it all came back again
To-night with the first spring thunder
In a rush of rain.

by Sara Teasdale (1884-1933)

Research Hive on Open Access

Posted in Open Access, The Universe and Stuff with tags , , , , on March 21, 2014 by telescoper

Near the end of a week that has been both exciting and exhausting, I had the opportunity to take part in a seminar on Open Access publishing. I agreed to do this last year sometime, and only remembered that it was today because I got an email reminder a couple of days ago! Anyway it was nice to have an excuse to visit the iconic Library of the University of Sussex for this event.

Fortunately, as things turned out, I had plenty of topical material to draw on for inspiration and spent some time discussion the possibilities of community peer review with reference with what’s been happening with BICEP2. Here’s me in the middle of the talk on that very subject showing the Live Discussion Facebook page:

Hive

I shared the bill with Rupert Gatti from Open House Press which publishes mainly in the Arts and Humanities area; generally speaking these disciplines are a long way behind astrophysics in terms of their readiness for the age of Open Access but I think change across all academia is inevitable.

For those of you interested I realize that an update on the Open Journal For Astrophysics is long overdue. I’ve just been too busy with other things to devote much time to it. I do hope to have further news very soon…

BICEP2, Social Media and Open Science

Posted in Open Access, The Universe and Stuff with tags , , , on March 20, 2014 by telescoper

I’ve been finding it a bit difficult to keep up with all the BICEP2 excitement in between all the other things I’ve had to do this week but at least the blog has been generating some interest and there’s no sign of that abating yet.  In fact, according to the wordpress elves, today is the busiest day I’ve ever had on In the Dark – and it’s not even 6pm yet!

I realize that I’ve posted several items on B-modes without ever showing a picture of what they look like, so here you go, an image of the B-mode polarization seen by the BICEP2 experiment:

b_over_b_rect_BICEP2

When the BICEP2 team announced that  a “major astrophysics discovery” would be announced this Monday I have to admit that I was quite a bit uncomfortable about the way things were being done. I’ve never been keen on “Science by Press Release” and when it became clear that the press conference would be announcing results that hadn’t yet been peer-reviewed my concerns deepened.

However, the BICEP2 team immediately made available not only the “discovery” paper but also the data products, so people with sufficient expertise (and time) could try to unpick the content. This is fully in the spirit of open science and I applaud them for it. Indeed one could argue that putting everything out in the open the way they have is ensuring that that their work is being peer-reviewed in the open by the entire cosmological community not secretly and by one or two anonymous individuals. The more I think about it the more convinced I am becoming that this is a better way of doing peer review than the traditional method, although before I decide that for sure I’d like to know whether the BICEP2 actually does stand up!

One of the particularly interesting developments in this case is the role social media are playing in the BICEP2 story. A Facebook Group was set up in advance of Monday’s announcement and live discussion started immediately the press conference started. The group now has well over 700 members, including many eminent cosmologists. And me. There’s a very healthy scientific discussion going on there which may well prove to be a model of how such things happen in the future. Is this a sign of a major change in the way science is done, the use of digital technology allowing science to break free from the shackles placed on it by traditional publication processes? Maybe.

Anyway, no time to write any more. I just remembered I have to participate in a seminar on Open Access publishing and I have to start thinking about what I’m going to say!

P.S. The Vernal Equinox happened at 16.:57 GMT today, so welcome to Spring!

BICEP2: Is the Signal Cosmological?

Posted in The Universe and Stuff with tags , , , , , on March 19, 2014 by telescoper

I have a short gap in my schedule today so I thought I would use it to post a short note about the BICEP2 results announced to great excitement on Monday.

There has been a great deal of coverage in the popular media about a “Spectacular Cosmic Discovery” and this is mirrored by excitement at a more technical level about the theoretical implications of the BICEP2 results. Having taken a bit of time out last night to go through the discovery paper, I think I should say that I think all this excitement is very premature. In that respect I agree with the result of my straw poll.

First of all let me make it clear that the BICEP2 experiment is absolutely superb. It was designed and built by top-class scientists and has clearly functioned brilliantly to improve its sensitivity so much that it has gone so far ahead of so many rivals:

Polarization detections

Notice that the only other detection of the elusive B-mode signal is by POLARBEAR, but that is actually accounted for by gravitational lensing effects rather than being evidence of a primordial gravitational wave contribution.

The B-mode signal is so weak that it is to mind absolutely amazing that an experiment can get anywhere near measuring it. There’s no denying the fact that BICEP2 team have done heroic work.

But – and it’s a big “but” – we have to ask the question “How confident can we be that the signal detected by BICEP2 is, in fact, the imprint of primordial gravitational waves on the cosmic microwave background that cosmologists were hoping for?”

The answer to this question will depend on the individual, but I would say that to convince me the absolute minimum would be a detection of the signal in more than one frequency band. A primordial signal should not vary as a function of frequency, whereas foreground emission (likely to be from dust) would be frequency dependent.

Now BICEP2 only operates at one frequency, 150GHz, so the experiment on its own can’t satisfy this criterion but it could through cross-correlation with the original BICEP1 instrument which worked at 100 GHz and 150 GHz. In the discovery paper we find the

Additionally, cross-correlating BICEP2 against 100GHz maps from the BICEP1 experiment, the excess signal is confirmed with 3sigma significance and its spectral index is found to be consistent with that of the CMB.

Here is the relevant plot, Figure 7 from the paper,

Xcor_BICEP

Well, the correct though the statement in the paper might be,  it is clear from this (rather ratty) cross-correlation that there is actually no firm detection of the B-modes at all at 100GHz. In other words, the 100 GHz BICEP1 data may be consistent with BICEP2 but they are also consistent with zero. (NOTE ADDED: I am ready to rescind this statement when I see a full analysis of these cross-correlations; at face value the scatter looks strange and certainly consistent with a null detection). In any case a positive cross-correlation does not exclude the possibility that the signal in common across the two channels is dust. If we only have a detection at one frequency we have no compelling evidence at all that the signal is cosmological.

When asked on Tuesday about this by Physics World I stated that I wasn’t convinced:

It seems to me though that there’s a significant possibility of some of the polarization signal in E and B [modes] not being cosmological. This is a very interesting result, but I’d prefer to reserve judgement until it is confirmed by other experiments. If it is genuine, then the spectrum is a bit strange and may indicate something added to the normal inflationary recipe.

My scepticism was then derived primarily from the distribution of the points around l=200 in the first figure: they look too high compared to the expected gravitational lensing contribution (which seems to have been pinned down by the POLARBEAR measurements to the right of the plot):

My concern: the three data points circles in blue are all higher than they should be, by about 0.01, which is the same height as the points to their left.  But the prediction of gravitational waves from inflation, circles in green, is that there should be very little contribution here --- which is why these points should lie closer to the solid red "lensing" prediction.  So the model of lensing for the right-hand part of the data + gravitational waves from inflation for the left-hand part of the data does not seem to be a very convincing fit.

I’ve taken this plot from the post I reblogged yesterday. The errors in the measurements ringed in blue are probably correlated so the fact that all three lie well above the red curve may not be as significant as it first seems, but note that the vertical scale is logarithmic. If some sort of systematic error has indeed bumped these points up then the amount of power involved could easily account for all the signal in the points to the left; the fit to the primordial B-mode (red dashed) part of the curve could then be fortuitous.

One possible systematic, apart from foreground contamination by dust, is leakage between E and B modes in the spherical harmonic decomposition. This arises because the spherical harmonic modes are only orthogonal over a complete sphere; BICEP2 does not map the whole sky, so the modes get mixed and separating them becomes extremely messy. Since the E-mode signal is so much larger, the worry is that some of it might leak into the B-mode.

UPDATE: 20/3/2014

I noticed a post on the BICEP2 Facebook Page from Hans Kristian Eriksen pointing another oddity:

PTE

The above plot is one of many showing jackknife estimates relating to various aspects of the polarization signal. What is strange is that all the blue dots lie so close to zero. Statistically speaking this is extremely unlikely and it may suggest that the noise levels have been over-estimated underestimated; roughly one in three data points should be further away than one sigma from zero if sigma is estimated correctly.

Taking all this together I have to say that I stick to the point of view I took when I first saw the results. They are very  interesting, but it is far too earlier to even claim that they are cosmological, let alone to start talking about providing evidence for or against particular models of the early Universe. No doubt I’ll be criticized for trying to put a wet blanket over the whole affair, but this is a measurement of such potential importance that I think we have to set the bar very high indeed when it comes to evidence. If I were running a book on this, I would put it at no better than even money that this is a cosmological signal.

Of course the rush to embrace these results as “definitive proof” of something is a product of human nature and the general level of excitement this amazing experiment has generated. That’s entirely understandable and basically a very good thing. It reminds those of us working in cosmology how lucky we are that we work in a field in which such momentous discoveries do actually happen. This is no doubt why so many budding scientists are drawn into cosmology in the first place. Let’s not forget, however, that there is a thing called the scientific method and often after years of hard work there remain more questions than answers. For the time being, that’s where we are with gravitational waves.

Bach – Vivace!

Posted in Music with tags , , on March 19, 2014 by telescoper

I heard a recording of this movement from Trio Sonata No. 6 in G Major by J.S. Bach this morning on BBC Radio 3 and thought it was so lovely I couldn’t resist finding a version of it to post on my own organ, as it were. This, the first movement, appropriately enough marked Vivace, has a bouncy exuberance that I find totally wonderful. I hope you like it too.

 

How solid is the BICEP2 B-mode result?

Posted in The Universe and Stuff with tags , , on March 18, 2014 by telescoper

Another wordpress post about BICEP2 – by astrophysicist Phil Bull – with some comments on possible issues with the data…

Phil Bull's avatarLumps 'n' Bumps

Phew! An exciting day indeed, so I’ll jot down a few notes to recap what happened.

The BICEP2/Keck experiments detected B-modes at large angular scales in the polarisation of the CMB. They released two papers and some data online just as the announcement was made, which you can find here. Not all of the data mind, but it’s plenty to go on for now.

Their interpretation of the data is that they detect a bump at low-ell that is characteristic of primordial B-modes generated by inflation. If true, this is super exciting, as it gives us a (sort of, but not really) direct detection of gravitational waves, and opens up a new window on the very early Universe (and hence extremely high energy scales). People are even saying it’s a probe of quantum gravity, which I guess is sort of true. Furthermore, they find a best-fit value of the…

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BICEP2: New Evidence Of Cosmic Inflation!

Posted in The Universe and Stuff with tags , , on March 18, 2014 by telescoper

Following on from yesterday’s news, here’s a more detailed analysis of the implications of the BICEP2 result from Matt Straessler’s blog. I certainly agree with the statement highlighted in red in his post:

Until this measurement/discovery is confirmed by another experiment, you should consider it provisional. Although this is too large a signal to be likely to be due to a pure statistical fluke, it could still be due to a mistake or problem, or due to something other than gravitational waves from inflation.

Matt Strassler's avatarOf Particular Significance

[For your reference if you can’t follow this post: My History of the Universe, and a primer to help you understand what’s going on today.]

I’m still updating this post as more information comes in and as I understand more of what’s in the BICEP2 paper and data. Talking to and listening to experts, I’d describe the mood as cautiously optimistic; some people are worried about certain weird features of the data, while others seem less concerned about them… typical when a new discovery is claimed.  I’m disturbed that the media is declaring victory before the scientific community is ready to.  That didn’t happen with the Higgs discovery, where the media was, wisely, far more patient.

The Main Data

Here’s BICEP2’s data!  The black dots at the bottom of this figure, showing evidence of B-mode polarization both at small scales (“Multipole” >> 100, where it is due to gravitational…

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