Author Archive

If it ain’t open, it ain’t science

Posted in Open Access, Science Politics, The Universe and Stuff with tags , , , , , , on May 16, 2011 by telescoper

Last Friday (13th March) the Royal Society launched a study into “openness in science”, as part of which they are inviting submisions from individuals and organizations. According to the Royal Society website

Science has always been about open debate. But incidents such as the UEA email leaks have prompted the Royal Society to look at how open science really is.  With the advent of the Internet, the public now expect a greater degree of transparency. The impact of science on people’s lives, and the implications of scientific assessments for society and the economy are now so great that  people won’t just believe scientists when they say “trust me, I’m an expert.” It is not just scientists who want to be able to see inside scientific datasets, to see how robust they are and ask difficult questions about their implications. Science has to adapt.”

I think this is a timely and important study which at the very least will reveal how different the attitude to this issue is between different science disciplines. On one extreme we have fields like astronomy, where the practice of making all data publically available is increasingly common and where most scientific publications are available free of charge through the arXiv. On the other there are fields where experimental data are generally regarded as the private property of the scientists involved in collecting the measurements or doing the experiments.

I have quite a simple view on this, which is that the default should be that  data resulting from publically funded research should be in the public domain. I accept that this will not always be possible owing to  ethical issues, such as when human subjects are involved, but that should be the default position.I have two reasons for thinking this way. One is that it’s public money that funds us, so we have a moral responsibility to be as open as possible with the public. The other is that the scientific method only works when analyses can be fully scrutinized and, if necessary, replicated by other researchers. In other words, to seek to prevent one’s data becoming freely available is profoundly unscientific.

I’m actually both surprised and depressed at the reluctance of some scientists to make their data available for scrutiny by other scientists, let alone members of the general public. I can give an example of  my own experience of an encounter with a brick wall when trying to find out more about the statistics behind a study in the field of neuroscience. Other branches of physics are also way behind astronomy and cosmology in opening up their research.

If scientists are reluctant to share their data with other scientists it’s very difficult to believe they will be happy to put it all in the public domain. But I think they should. And I don’t mean just chucking terabytes of complicated unsorted data onto a website in such a way that it’s impossible in practice to make use of. I mean fully documented, carefully maintained databases with both raw data, analysis tools and data products. An exemplar is the excellent LAMBDA site which is a repository for data arising for research into the Cosmic Microwave Background.

I’ve ranted before (and will no doubt do so again) about the extremely negative effect the academic publishing industry has on the dissemination of results. At out latest Board of Studies meeting, the prospect of further cuts to our library budget was raised and the suggestion made that we might have to cancel some of our journal subscriptions. I, and most of my astronomy colleagues, frankly don’t really care if we cancel astronomy journals. All our relevant papers can be found on the arXiv and/or via the NASA/ADS system. My physics colleagues, on the other hand, are still in hock to the old-fashioned and ruinously expensive academic journal racket.

One of the questions the Royal Society study will ask is:

How do we make information more accessible and who will pay to do it?

I’m willing to hazard a guess that if we worked out how much universities and research laboratories are spending on pointless journal subscriptions, then we’d find that it’s more than enough to pay for the construction and maintenance of  sufficient  open access repositories.  The current system of publishing could easily be scrapped, and replaced by something radically different, but it won’t be easy to change to a new approach more suited to the era of the internet.  For example, at present  we are forced to  publish in “proper journals” for the purposes of research assessments, so that academic publishers wield immense power over university researchers. These vested interests will be difficult to overthrow, but I think there’s a growing realization that they are actively preventing science adjusting properly to the digital age.

Anyway, whether or not you agree with me, I hope you’ll agree that the Royal Society study is an important one so please take a look and contribute if you can.

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Mr PC

Posted in Jazz with tags , , on May 16, 2011 by telescoper

I came across this just now and it completely blew me away so I thought I’d share it  here. It’s a solo version of the John Coltrane tune Mr PC  by the amazing (British-born) bassist Dave Holland. Words totally unnecessary. Wow will do.

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Ba-dum Ching!

Posted in Music with tags , , , , on May 15, 2011 by telescoper

One of the good things about having a blog is the chance to bore the entire internet with your own peculiar obsessions. As regular readers of In the Dark will be aware, one of my fascinations is the origin and evolution of words and phrases. This morning I had an interesting exchange on Twitter with neuroscientist and comedian extraordinaire Dean Burnett, which revolved around the word “rimshot”…and a similar word with quite different meaning which I won’t repeat in polite company.

Ever wondered what the name is for  the (often ironic) drum effect often used in cabaret or night club acts to puncuate a joke, like this?

Well, the answer is “rimshot”.

Or at least that’s the word that’s pretty universally used by comedians.

Curiously, though, if you are a percussionist rather than a comedian then a rimshot is something quite different. My father was a drummer so I had a lot of relevant terminology (flams, paradiddles, chokes, you name it) drummed into me when I was a kid. Technically, in fact, a rimshot is a single sound created by hitting the head of the drum and the rim at the same time with a drumstick. It’s an effect probably used more frequently in jazz than in other forms of music, and a good example can be heard on Miles Davis classic Summertime on which the excellent Philly Joe Jones applies a rimshot to every 4th beat of the bar. The clicking sound is something similar to that produced by claves. Nothing much to do with the word as used by comedians, then…

The word used by drummers for what comedians call a rimshot  is actually a sting. That’s certainly what my Dad always called it anyway. He often had to play in Working Mens’ Clubs and didn’t really like being on with comedians, most of whom were terrible and also told extremely blue jokes. In fact, I’m pretty sure he only ever used a sting in the ironic sense, when the gag was exceptionally poor.

There are many possible variants of the sting but the basic “ba-doom ching” is this:

which involves a tom-tom, closely followed by a kick on the bass drum, then a short pause followed by the bass drum and snare played together at the same time as a choked cymbal crash. Some stings are more elaborate than this, and a sting can indeed involve a rimshot, but most I’ve heard don’t.

Of course it’s not at all unusual for one word to have different meanings in different fields, so I’m not arguing that “rimshot” is wrong, but it’s interesting (at least to me) to wonder how when and why this divergence of meaning happened..

Incidentally, at the risk of boring you all even further, I’d add that the comedian’s rimshot has also evolved via a metonymic shift to refer not only to the sound the drummer makes but also to the joke that provoked it. In other words, an exceptionally good (or, more likely, bad)  gag is often itself referred to as a rimshot.

And with that, my time’s up. You’ve been a lovely audience. Thank you, and goodnight.

Ba-Dum Ching!

P.S. If you’re ever in need of a rimjob rimshot, you can get one here.

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Infinity or not Infinity?

Posted in The Universe and Stuff with tags , , , , , , on May 14, 2011 by telescoper

Most of us – whether scientists or not – have an uncomfortable time coping with the concept of infinity. Physicists have had a particularly difficult relationship with the notion of boundlessness, as various kinds of pesky infinities keep cropping up in calculations. In most cases this this symptomatic of deficiencies in the theoretical foundations of the subject. Think of the ‘ultraviolet catastrophe‘ of classical statistical mechanics, in which the electromagnetic radiation produced by a black body at a finite temperature is calculated to be infinitely intense at infinitely short wavelengths; this signalled the failure of classical statistical mechanics and ushered in the era of quantum mechanics about a hundred years ago. Quantum field theories have other forms of pathological behaviour, with mathematical components of the theory tending to run out of control to infinity unless they are healed using the technique of renormalization. The general theory of relativity predicts that singularities in which physical properties become infinite occur in the centre of black holes and in the Big Bang that kicked our Universe into existence. But even these are regarded as indications that we are missing a piece of the puzzle, rather than implying that somehow infinity is a part of nature itself.

The exception to this rule is the field of cosmology. Somehow it seems natural at least to consider the possibility that our cosmos might be infinite, either in extent or duration, or both, or perhaps even be a multiverse comprising an infinite collection of sub-universes. If the Universe is defined as everything that exists, why should it necessarily be finite? Why should there be some underlying principle that restricts it to a size our human brains can cope with?

On the other hand, there are cosmologists who won’t allow infinity into their view of the Universe. A prominent example is George Ellis, a strong critic of the multiverse idea in particular, who frequently quotes David Hilbert

The final result then is: nowhere is the infinite realized; it is neither present in nature nor admissible as a foundation in our rational thinking—a remarkable harmony between being and thought

But to every Hilbert there’s an equal and opposite Leibniz

I am so in favor of the actual infinite that instead of admitting that Nature abhors it, as is commonly said, I hold that Nature makes frequent use of it everywhere, in order to show more effectively the perfections of its Author.

You see that it’s an argument with quite a long pedigree!

When I was at the National Astronomy Meeting in Llandudno a few weeks ago, I attended an excellent plenary session that featured this year’s Gerald Whitrow Lecture, by Alex Vilenkin, entitled The Principle of Mediocrity. This was a talk based on some ideas from his book Many Worlds in One: The Search for Other Universese, in which he discusses some of the consequences of the so-called eternal inflation scenario, which leads to a variation of the multiverse idea in which the universe comprises an infinite collection of causally-disconnected “bubbles” with different laws of low-energy physics applying in each. Indeed, in Vilenkin’s vision, all possible configurations of all possible things are realised somewhere in this ensemble of mini-universes. An infinite number of National Astronomy Meetings, each with the same or different programmes, an infinite number of Vilenkins, etc etc.

One of the features of this scenario is that it brings the anthropic principle into play as a potential “explanation” for the apparent fine-tuning of our Universe that enables life to be sustained within it. We can only live in a domain wherein the laws of physics are compatible with life so it should be no surprise that’s what we find. There is an infinity of dead universes, but we don’t live there.

I’m not going to go on about the anthropic principle here, although it’s a subject that’s quite fun to write or, better still, give a talk about, especially if you enjoy winding people up! What I did want to say mention, though, is that Vilenkin correctly pointed out that three ingredients are needed to make this work:

  1. An infinite ensemble of realizations
  2. A discretizer
  3. A randomizer

Item 2 involves some sort of principle that ensures that the number of possible states of the system we’re talking about  is not infinite. A very simple example from  quantum physics might be the two spin states of an electron, up (↑) or down(↓). No “in-between” states are allowed, according to our tried-and-tested theories of quantum physics, so the state space is discrete.  In the more general context required for cosmology, the states are the allowed “laws of physics” ( i.e. possible  false vacuum configurations). The space of possible states is very much larger here, of course, and the theory that makes it discrete much less secure. In string theory, the number of false vacua is estimated at 10500. That’s certainly a very big number, but it’s not infinite so will do the job needed.

Item 3 requires a process that realizes every possible configuration across the ensemble in a “random” fashion. The word “random” is a bit problematic for me because I don’t really know what it’s supposed to mean. It’s a word that far too many scientists are content to hide behind, in my opinion. In this context, however, “random” really means that the assigning of states to elements in the ensemble must be ergodic, meaning that it must visit the entire state space with some probability. This is the kind of process that’s needed if an infinite collection of monkeys is indeed to type the (large but finite) complete works of shakespeare. It’s not enough that there be an infinite number and that the works of shakespeare be finite. The process of typing must also be ergodic.

Now it’s by no means obvious that monkeys would type ergodically. If, for example, they always hit two adjoining keys at the same time then the process would not be ergodic. Likewise it is by no means clear to me that the process of realizing the ensemble is ergodic. In fact I’m not even sure that there’s any process at all that “realizes” the string landscape. There’s a long and dangerous road from the (hypothetical) ensembles that exist even in standard quantum field theory to an actually existing “random” collection of observed things…

More generally, the mere fact that a mathematical solution of an equation can be derived does not mean that that equation describes anything that actually exists in nature. In this respect I agree with Alfred North Whitehead:

There is no more common error than to assume that, because prolonged and accurate mathematical calculations have been made, the application of the result to some fact of nature is absolutely certain.

It’s a quote I think some string theorists might benefit from reading!

Items 1, 2 and 3 are all needed to ensure that each particular configuration of the system is actually realized in nature. If we had an infinite number of realizations but with either infinite number of possible configurations or a non-ergodic selection mechanism then there’s no guarantee each possibility would actually happen. The success of this explanation consequently rests on quite stringent assumptions.

I’m a sceptic about this whole scheme for many reasons. First, I’m uncomfortable with infinity – that’s what you get for working with George Ellis, I guess. Second, and more importantly, I don’t understand string theory and am in any case unsure of the ontological status of the string landscape. Finally, although a large number of prominent cosmologists have waved their hands with commendable vigour, I have never seen anything even approaching a rigorous proof that eternal inflation does lead to realized infinity of  false vacua. If such a thing exists, I’d really like to hear about!

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Solvay 1927 – A Film Clip (via Manjit Kumar’s Random Walks)

Posted in Uncategorized on May 14, 2011 by telescoper

Fascinating footage of famous physicists…

..including Einstein and Bohr, seen in 1927.

Solvay 1927 - A Film Clip If you want to see extremely rare footage of some of the participants leaving the fifth Solvay conference held in Brussels in October 1927, its available here. Shot by the American Irving Langmuir, its just under 3 minutes long and shows Einstein, Bohr, Schrodinger, Heisenberg, Pauli, Born, de Broglie, Dirac and others after a day discussing quantum mechanics. The commentary is provided by Nancy Thorndike Greenspan, the author of an excellent bio … Read More

via Manjit Kumar’s Random Walks

Cutting Remarks

Posted in Finance, Politics, Science Politics with tags , , , , , on May 13, 2011 by telescoper

I know you’ve all been waiting with baited breath for news of the outcome of the House of Commons Science and Technology Committee‘s report into Astronomy and Particle Physics in the UK.

Well, it’s out now. You can find the web version of the report here and it’s also available as a PDF file there. There’s also a press release with the headline

MPs warn astronomy and particle physics budgets cuts will hit UK science hard

Journalists have obviously been busy overnight – the report was released at midnight, I believe – and there are stories all over the press this morning, including The Guardian, and the journal Science as well as the BBC. The Royal Astronomical Society and the Institute of Physics have also been quick to respond.

Apart from the savage cuts themselves – which the committee correctly suggest will reduce astronomy and particle physics spending by 2014/15 to about 50% of the level it was at in 2005 – the great tragedy of this story is that it has taken so long to recognize the scale of the disaster. Most of the damage was done way back in 2007 when the Science and Technology Facilities Council (STFC) was first set up. I’d suggest there is an error in the tense of the verb “to hit” in the headline above. It would be more accurate as

MPs warn astronomy and particle physics budgets cuts HAVE ALREADY hit UK science hard, and are getting worse all the time..

Last year’s Comprehensive Spending Review had relatively good news for STFC, with a settlement corresponding to level funding in cash terms. However, the Bank of England has recently stated that it expects inflation to reach 5% this year, which means that science will actually be getting 5% year-on-year real terms cuts on top of what it received in 2007. It’s a pretty dire situation.

The report also raises a doubt over whether the current Chief Executive, Keith Mason, has the “ability to command the confidence of the scientific community”. No shit.

I don’t have time to write much more on this right now as I have lectures to do, but perhaps others out there might feel the urge to start a discussion through the comments box…

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Of Many Worlds in this World

Posted in Poetry with tags , on May 12, 2011 by telescoper

Just like as in a Nest of Boxes round,
Degrees of Sizes in each Box are found:
So, in this World, may many others be
Thinner and less, and less still by degree:
Although they are not subject to our sense,
A World may be no bigger than Two-pence.
NATURE is curious, and such Works may shape,
Which our dull senses easily escape:
For Creatures, small as Atoms, may be there,
If every one a Creature’s Figure bear.
If Atoms Four, a World can make, then see
What several Worlds might in an Ear-ring be:
For, Millions of those Atoms may be in
The Head of one small, little, single Pin.
And if thus small, then Ladies may well wear
A World of Worlds, as Pendents in each Ear.

by Margaret Cavendish (1623-1673), Duchess of Newcastle upon Tyne. Her remarkable book The Blazing World was one of the first ever works of science fiction.

Local Matters

Posted in Education, Finance, Politics, Science Politics with tags , , , , , on May 12, 2011 by telescoper

I think I’ve caught up with most of the signficant things that happened during my travels, so I thought I’d end this series of updates with some local news from Cardiff (and Wales generally).

First, I can pass on some information relating to the  number of potential students applying to study Physics (and related subjects) this forthcoming academic year (2011/12) in the School of Physics & Astronomy at Cardiff University.  I blogged about this a few months ago when it became obvious that we were having a bumper year. As it turns out, we finished with applications up by a whopping 53% on last year.

Second, and related to the first item, the detailed allocations of university funding in Wales have finally filtered down all the way from HEFCW, through the Cardiff University management, and onto individual schools.  As it happens, this has also turned out not too badly for us here in Physics & Astronomy. For various reasons we’ve finally been given the increase in student numbers that we have been requesting for some time without success. In fact we’ve been given an extra 60 funded places, which is a significant uplift in our quota and a much-needed financial boost for the School. This has happened basically because of HECFW‘s desire to bolster STEM subjects as part of a range of measures related to the Welsh Assembly Government’s plans for the regions.

Unfortunately the admissions team have so far been proceeding on the basis that demand would exceed supply for this year so has set our undergraduate offers rather high. In order to fill the extra places that have been given to us late in the day, even with our vastly increased application numbers we may have to go into the clearing system to recruit some of the extra bodies. We’ll have to wait until the A-level results come out in August, however, before we know what the situation really is.

It would have been a lot easier if we’d known the rules at the start of the game, rather than near the end, but that’s the way it goes when politicians start tinkering with things…

We will have to lay on extra tutorials and laboratory sessions to cope with the anticipated increase in student numbers, which will be a bit of a struggle, but the extra money they bring in should keep the wolf from the door for a while.

Another thing worth mentioning concerns research in Wales. In the run-up to the Welsh Assembly elections, the Campaign for Science and Engineering (CASE) produced a couple of interesting documents. One was about science policy in the devolved nations and the other was a comparison of STEM subjects across the UK.

These documents make it clear that Wales lags far beyond England and (particularly) Scotland in terms of investment in, and productivity of, its scientific research.  In its  recommendations for Wales, CASE included

    • The Higher Education Funding Council for Wales must increase its investment in research – as well as improving the research base directly, this investment should bring more success in winning competitive, UK-wide funding. The indirect costs of charitably funded research should continue to be covered.
    • Policies should continue to build up the critical mass of research through collaboration, including with overseas researchers or businesses.

As I reported recently, we (Cardiff, Swansea and Aberystwyth) have tried to persuade HECFW to fund a Welsh physics initiative, intended to achieve precisely what CASE suggests. Unfortunately HECFW turned our bid down. At least for the short term, additional investment in physics research is clearly not on the agenda for HEFCW.  There’s not much sign of it happening in the future either, but we will have to wait and see…

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Shooting at the Cosmic Circles

Posted in Astrohype, Bad Statistics, The Universe and Stuff with tags , , , , on May 11, 2011 by telescoper

Another brief update post of something that whizzed past while I was away and thought I’d mention now that I’m back.

Remember the (now infamous) paper by Gurzadyan and Penrose about evidence for the Conformal Cyclic Cosmology that I blogged about last year?

The original analysis was comprehensively dissected and refuted by a number of papers within a few days of its appearance – see here, here and here – only for Gurzadyan and Penrose to dig an even bigger hole for themselves with a nonsensical reply.

Undaunted, the dynamic duo of Gurzadyan and Penrose have produced yet another paper on the same subject which came out just as I was heading off on my hols.

There has subsequently been another riposte, by Eriksen and Wehus, although I suspect most cosmologists ceased to care about this whole story some time ago. Although it’s a pretty easy target, the Eriksen-Wehus reply does another comprehensive demolition job. The phrase “shooting fish in a barrel” sprang to my mind, but from facebook I learned that the equivalent idiomatic expression in Italian is sparare sulla Croce Rossa (i.e. shooting on the Red Cross). Perhaps we can add a brand new phrase for “taking aim at an easy target” – shooting at the cosmic circles!

I was struck, however, by the closing sentences of the abstract of Eriksen-Wehus reply:

Still, while this story is of little physical interest, it may have some important implications in terms of scienctific sociology: Looking back at the background papers leading up to the present series by Gurzadyan and Penrose, in particular one introducing the Kolmogorov statistic, we believe one can find evidence that a community based and open access referee process may be more efficient at rejecting incorrect results and claims than a traditional journal based approach.

I wholeheartedly agree. I’ve blogged already to the effect that academic journals are a waste of time and money and we’d be much better off with open access and vigorous internet scrutiny. It may be that this episode has just given us a glimpse of the future of scientific publishing.

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Public Attitudes to Science

Posted in Biographical, Science Politics with tags , , , , on May 10, 2011 by telescoper

Another quick bit of news to catch up on concerns the publication (on May 2nd) of a study by Ipsos MORI into Public Attitudes to Science. I have a special interest in this study because in fact I took part in it, in the role of a sort of science observer at the session held in Cardiff, which I blogged about in November 2010.

The study was not based on a particularly large sample – only 2103 people – but the results are quite interesting (and perhaps surprising). You can download the full report here, including a mention of yours truly on page 121, but it’s worth mentioning a few of the headline results for those of you who haven’t the energy to read the entire document. For example,

  • 82%  thought that “science is such a big part of our lives that we should all take an interest”
  • 88% thought that scientists “make a valuable contribution to society”
  • 82% thought that scientists “want to make life better for the average person”

On the other hand

  • 51% thought  they see and hear too little information about science
  • 56%  do not feel well informed about scientific research and developments
  • 66% think that scientists should listen more to what ordinary people think.

These last three numbers compare unfavourably with corresponding figures from an earlier survey done in 2008. I’m not sure whether the results are surprising or not, but the results were considered sufficiently important for a Press Release from the Department for Business Industry and Skills (BIS) along with a response from RCUK which make interesting reading. Minister David Willetts is quoted as saying

Science, technology, engineering and maths are vital to economic growth. It’s encouraging that people are increasingly interested in research and new developments. However, more disappointingly, at the same time they feel less informed. People want more information and to engage with these subjects in a way that’s relevant to them. That’s a very clear message which Government has an important role in responding to.

The RCUK statement includes the following

RCUK is committed to working with researchers to encourage them to engage the public with their work. Along with the other UK funders of research, RCUK has underlined this commitment by putting in place the Concordat for Engaging the Public with Research. The Concordat aims to create a greater focus on and help embed public engagement with research across all disciplines in the higher education and research sectors. By establishing an ongoing dialogue between the research community and the public, society can benefit more fully from the outputs of research. A copy of the Concordat is available here.

While it’s good to see a high-level endorsement of the importance of outreach and public engagement, it remains to be seen how well this message propagates to individual departments and research groups, not all of which take these activities as seriously as they should in terms of rewarding staff taking part in them.

I also think that part of the difficulty lies not with scientists, but with the mass media who  seem reluctant to accept that there is a significant demand for in-depth  science coverage, e.g. on television.

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