Archive for Open Access

Learned Societies and Open Access

Posted in Open Access with tags , , , , , on November 8, 2018 by telescoper

Tuesday’s quick post about a letter of opposition to Plan S generated some comments from academics about the role of “Learned Societies” in academic publishing.  I therefore think it’s relevant to raise some points about the extent that these organizations (including, in my field,  the Royal Astronomical Society and the Institute of Physics) rely for their financial security upon the revenues generated by publishing traditional journals.

Take IOP Publishing, for example. This is a wholly-owned subsidiary of the Institute of Physics that has an annual turnover of around £60M generated from books and journals. This revenue is the largest contribution to the income that the IoP needs to run its numerous activities relating to the promotion of physics.  A similar situation pertains to the Royal Astronomical Society, although on a smaller scale, as it relies for much of its income from Monthly Notices of the Royal Astronomical Society, in which as a matter of fact I have published quite a few papers.

Not surprisingly, these and other learned societies are keen to protect their main source of cash. When I criticized the exploitative behaviour of IoP Publishing some time ago in a recent blog post, I drew a stern response from the Chief Executive of the Institute of Physics, Paul Hardaker. That comment seems to admit that the high prices charged by IOP Publishing for access to  its journals is nothing to do with the real cost of disseminating scientific knowledge but is instead a means of generating income to allow the IoP to pursue its noble aim of  “promoting Physics”.

This is the case for other learned societies too, and it explains why such organizations have lobbied very hard for the “Gold” Open Access some authorities are attempting to foist on the research community, rather than the far more sensible and sustainable “Green” Open Access model and its variants.

Some time ago I came across another blog post, pointing out that other learned societies around the world are also opposing Green Open Access:

There is also great incentive for the people who manage and run these organisations to defend their cartel. For example, the American Chemical Society, a huge opponent to open access, pays many of its employees, as reported in their 990 tax return, over six figures. These salaries ranged from $304,528 to $1,084,417 in 2010.

The problem with the learned societies behaving this way is twofold.

First, I consider it to be inevitable that the traditional journal industry will very soon be completely bypassed in favour of some form of green (or at least not gold) Open Access. The internet has changed the entire landscape of scientific publication. It’s now so cheap and so easy to disseminate knowledge that traditional journals are already virtually redundant, especially in my field of astrophysics where we have been using the arXiv for so long that many of us hardly ever look at journals.

The comfortable income stream that has been used by the IoP to “promote Physics”, as well as to furnish its brand new building in King’s Cross, will dry up unless these organizations find a way of defending it. The “Gold” OA favoured by such organizations their attempt to stem the tide. I think this move into Gold `Open Access’, paid for by ruinously expensive Article Processing charges paid by authors (or their organizations) is unsustainable because the research community will see through it and refuse to pay.

The other problematic aspect of the approach of these learned societies is that I think it is fundamentally dishonest. University and institutional libraries are provided with funds to provide access to published research, not to provide a backdoor subsidy for a range of extraneous activities that have nothing to do with that purpose. The learned societies do many good things – and some are indeed outstandingly good – but that does not give them the right to siphon off funds from their constituents in this way.  Institutional affiliation, paid for by fee, would be a much fairer way of funding these activities.

I should point out that, as a FRAS and a FInstP, I pay annual subscriptions to both the RAS and the IoP. I am happy to do so, as I feel comfortable spending some of my own money supporting astronomy and physics. What I don’t agree with is my department having to fork out huge amounts of money from an ever-dwindling budget for access to scientific research that should be in the public domain because it has already been funded by the taxpayer.

Some time ago I had occasion to visit the London offices of a well-known charitable organization which shall remain nameless. The property they occupied was glitzy, palatial, and obviously very expensive. I couldn’t help wondering how they could square the opulence of their headquarters with the quoted desire to spend as much as possible on their good works. Being old and cynical, I came to the conclusion that, although charities might start out with the noblest intentions, there is a grave danger that they simply become self-serving, viewing their own existence in itself as more important than what they do for others.

The commercial academic publishing industry has definitely gone that way. It arose because of the need to review, edit, collate, publish and disseminate the fruits of academic labour. Then the ease with which profits could be made led it astray. It now fulfills little or no useful purpose, but simply consumes financial resources that could be put to much better effect actually doing science. Fortunately, I think the scientific community knows this and the parasite will die a natural death.

The question for learned societies is whether they can find a sustainable funding model that isn’t reliant upon effectively purloining funds from university library budgets. If their revenue from publishing does fall, can they replace it? And, if not, in what form can they survive?

Chemists against Plan S..

Posted in Open Access, The Universe and Stuff with tags , , , , on November 6, 2018 by telescoper

There’s an `Open Letter’ doing the rounds which rails against the European Plan S for open access to research papers . You can find it here on Google Docs. It is apparently initiated by some chemists, and there are very few signatories who are not chemists, though the language used in the letter suggests that the authors are talking for a much broader group.

My own thoughts on Plan S can be found here. I’m basically supportive of it. I suggest you read the letter for yourself and decide what you think. I think there are many rather inaccurate statements in it, including the idea that the journals run by Learned Societies are not profit-making. In my experience some of the most exploitative publishing practice comes from these organizations, though it takes something to beat the likes of Elsevier and Springer in that regard.

I share the concern about some researchers being driven to expensive `Gold’ Open Access modes of publication,  which is why I started the Open Journal of Astrophysics which I think offers a viable route to peer-reviewed publication that’s not only low-cost, but entirely free for authors and readers. Open Access publication is really not expensive to do. It’s just that some organizations see it as an opportunity to make enormous profits.

Incidentally, I just came across this summary of different routes to open access and their implications here:

In my opinion, Column H is the place to be!

I’ve given quite a few talks about Open Access recently and one of the things that struck me in the Q & A sessions after them is the extent to which attitudes differ in different disciplines. My own research area, astrophysics and cosmology, embraced open access over twenty-five years ago. Virtually every paper published in this discipline can be found for free on the arXiv, as is the case for particle physics. More recently, condensed matter physics and some branches of mathematics have joined in.

Chemistry, by contrast, is conspicuous by its absence from the arXiv. I don’t know why. Moreover, those who have expressed the most negative attitudes to Open Access whenever I’ve given talks about it have always been chemists. And now there’s this letter. It’s definitely part of a pattern. If any chemists out there are reading this, perhaps they could tell me why there’s such an enormous cultural difference between physics and chemistry when it comes to research publication?

The Letter states (paragraph 4):

Plan S has (probably) a much larger negative effect on chemistry than on some other fields.

Maybe so, but isn’t that just another way of saying that chemistry is more in need of cultural change than other disciplines?

P.S. I’d be happy to advise anyone interested in setting up an Open Journal of Chemistry, but if you want it to run like the Open Journal of Astrophysics you will have to set up a chemistry arXiv first – and that’s a much bigger job!

P.P.S. Thanks to a comment below I now know that there is a Chemistry archive, but it only has a small number (hundreds) of papers on it. Moreover, it does not host final refereed versions of papers. It is run by the American Chemical Society, German Chemical Society, and the Royal Society of Chemistry all learned societies who are opposed to Open Access no doubt because it threatens their funding models.

Another Day, Another Open Access Talk..

Posted in Biographical, Maynooth, Open Access with tags , , on October 26, 2018 by telescoper

So having exercised my franchise earlier this morning, I found myself in Maynooth University Library giving yet another talk about Open Access publishing as part of Open Access Week.

I’ve got a lecture at noon, which will be the last one I give before the half-term `Study Week’ which begins with a bank holiday on Monday 29th October (Lá Saoire i mí Dheireadh Fómhair). It’s very nice to have a break before Christmas like this. Also the University study week is timed to be the same as School half-term holidays, which is good for those members of staff who have kids of school age.

Well, that’s enough blogging. I need to get my vector calculus notes together. I’m doing line integrals today, by the way

The Open Journal Launch Event

Posted in Maynooth with tags , , , , on October 9, 2018 by telescoper

Tuesday afternoons are usually quite busy for me, with teaching sessions from 12-2 and 3-4 this term, but today turned into almost four consecutive hours of activity as I gave a talk on Open Science at a lunchtime event as part of Maynooth University’s Library `Publication Festival’ which, in turn, is part of `Research Week’. I talked about Open Science generally from the point of view of astrophysics for a bit, but the main purpose of the event was to launch the Open Journal of Astrophysics which also marks the debut of Maynooth Academic Publishing as an OA publisher. Fortunately I’d managed to get everything up and running before the talk so I was able to show the assembled throng the actual journal with actual papers.

Anyway, here are my slides if you’re interested.

P.S. The gentleman at the left of the picture is Professor Philip Nolan, the President of Maynooth University, who launched today’s event.

P.P.S. I’d like to point out that I did not mock the UK Prime Minister Theresa May by dancing at the podium prior to my presentation.

 

 

The Open Journal of Astrophysics – Update

Posted in Maynooth, Open Access, The Universe and Stuff with tags , , , on October 4, 2018 by telescoper

Well, it was a bit fiddly importing the legacy papers from the earlier version of the Open Journal of Astrophysics website to the new platform, but I managed to do it this afternoon as planned. The result looks rather nice, I think,

The only things left to do now are (a) to train the members of the Editorial Board on how to handle the workflow through the journal site and (b) to open up for submission of new papers. Both these steps should be trivial so we’re definitely entering the final stages of this project. There is  an event at Maynooth University Library next Tuesday afternoon at which I am doing a talk about Open Science. This will represent the official launch of the Open Journal of Astrophysics.

All we will need then is for people to submit some papers!

 

 

Thoughts on `Plan S’, `cOAlition S’ and Open Access Publishing

Posted in Open Access with tags , , , , , , on September 22, 2018 by telescoper

Those of you who have been following my recent updates on progress with The Open Journal of Astrophysics may be interested to hear about `Plan S’, which is a proposal by 11 European Nations to give the public free access to publicly funded science. The 11 countries involved in this initiative are: France, Italy, Austria, Ireland, Luxembourg, the Netherlands, Norway, Poland, Slovenia, Sweden, and the UK. Since the plan will not come into effect until 1st January 2020, which is after the UK leaves the EU it is by no means clear whether the UK will actually be involved in ERC initiatives after that. Norway is not in the EU but is associated to the ERC. It is unlikely that the UK will have a similar status after Brexit.

Anyway, these 11 countries have formed `cOAlition S’ – the `OA’ is for `Open Access’ – to carry out the plan, which can be found here.

Here is a summary:

You can read more about it here. I have not yet looked at the details of what will be regarded as `compliant’ in terms of Open Access but if the the Open Journal of Astrophysics is not fully compliant as it stands, I expect it can be made so (although we are a genuinely international journal not limited to the 11 countries involved in Plan S).

Anyway, although I support Plan S in general terms what I sincerely hope will not happen with this initiative is that researchers and their institutions get mugged into paying an extortionate `Gold’ Open Access Article Processing Charge (APC) which is simply a means for the academic publishing industry to maintain its inflated profit margins at the expense of actual research. The Open Journal of Astrophysics is Green rather than Gold. In fact the cost of maintaining and running the platform is about $1000 per annum, and the marginal cost for processing each paper is $10 or actually $11 if you count registering published articles with CrossRef (though we do not incur that cost if the article is rejected). In effect running the entire journal costs less than a typical APC for Gold Open Access for one physics paper. Those costs will be born by my institution, Maynooth University. The UK was conned into going down this route some years ago by the publishing lobby, and I hope the other cOAlition S partners do not fall for the same scam.

The Open Journal of Astrophysics and NASA/ADS

Posted in Uncategorized with tags , , , , on September 18, 2018 by telescoper

As I’m working on the Open Journal of Astrophysics project quite a lot these days I’m probably going to be boring a lot of people with updates, but there you go.

First astro.theog.org is now transferred to the new platform here. It doesn’t look like much now but there is a lot sitting behind the front page and we will get the new site up and running when we’ve got various administrative things approved.

Another thing I forgot to mention in yesterday’s post concerns the SAO/NASA Astrophysics Data System which (for the uninitiated) is a Digital Library portal for researchers in astronomy and physics, operated by the Smithsonian Astrophysical Observatory (SAO) under a NASA grant. The ADS maintains three bibliographic databases containing more than 14.0 million records covering publications in Astronomy and Astrophysics, Physics, and (of course) the arXiv e-prints. In addition to maintaining its bibliographic corpus, the ADS tracks citations and other information, which means that it is an important tool for evaluating publication impact.

One of the issues that we’ve had with the handful of papers published so far by the Open Journal of Astrophysics is that, because it is an overlay journal, the primary location of the papers published is on the arXiv, alongside other content that has not been refereed. Up until recently searching ADS for `All bibliographic sources’ would return OJA papers, but `All refereed articles’ would not. I’m glad to say that with the help of the ADS team, this issue has now been resolved and OJA papers now show up as refereed articles, as demonstrated by this example:

I know that this was a particular worry for early career researchers who might have been deterred from submitting to the Open Journal of Astrophysics by the fear that their publications would not look like refereed publications. They need worry no longer!

Incidentally, that image also shows that citations are tracked through the CROSSREF system, in which OJA papers are registered when published and issued with a DOI. All this happens behind the scenes from the point of view of an author, but it involves a lot of interesting machinery! A discussion on facebook the other day led to an academic publisher stating that one of the greatest costs of running a journal was registering publications for citation tracking. In fact it costs a maximum of $1 per article (see here). The industry is relying on academics not understanding how cheap things actually are.

 

The Open Journal of Astrophysics – Call for Editors

Posted in Maynooth, Open Access with tags , , , on September 17, 2018 by telescoper

It’s nice to see that my recent post on the Open Journal of Astrophysics has been attracting some interest. The project is developing rather swiftly right now and it seems the main problems we have to deal with are administrative rather than technical. Fingers crossed anyway.

I thought I’d do a follow-up re-iterating a request in that recent post. As you will be aware, the Open Journal of Astrophysics is an arXiv overlay journal. We apply a simple criterion to decide whether a paper is on a suitable topic for publication, namely that if it it is suitable for the astro-ph section of the arXiv then it is suitable for the Open Journal of Astrophysics. This section of the arXiv, which is rather broad,is divided thuswise:

  1. astro-ph.GA – Astrophysics of Galaxies.
    Phenomena pertaining to galaxies or the Milky Way. Star clusters, HII regions and planetary nebulae, the interstellar medium, atomic and molecular clouds, dust. Stellar populations. Galactic structure, formation, dynamics. Galactic nuclei, bulges, disks, halo. Active Galactic Nuclei, supermassive black holes, quasars. Gravitational lens systems. The Milky Way and its contents
  2. astro-ph.CO – Cosmology and Nongalactic Astrophysics.
    Phenomenology of early universe, cosmic microwave background, cosmological parameters, primordial element abundances, extragalactic distance scale, large-scale structure of the universe. Groups, superclusters, voids, intergalactic medium. Particle astrophysics: dark energy, dark matter, baryogenesis, leptogenesis, inflationary models, reheating, monopoles, WIMPs, cosmic strings, primordial black holes, cosmological gravitational radiation
  3. astro-ph.EP – Earth and Planetary Astrophysics.
    Interplanetary medium, planetary physics, planetary astrobiology, extrasolar planets, comets, asteroids, meteorites. Structure and formation of the solar system
  4. astro-ph.HE – High Energy Astrophysical Phenomena.
    Cosmic ray production, acceleration, propagation, detection. Gamma ray astronomy and bursts, X-rays, charged particles, supernovae and other explosive phenomena, stellar remnants and accretion systems, jets, microquasars, neutron stars, pulsars, black holes
  5. astro-ph.IM – Instrumentation and Methods for Astrophysics.
    Detector and telescope design, experiment proposals. Laboratory Astrophysics. Methods for data analysis, statistical methods. Software, database design
  6. astro-ph.SR – Solar and Stellar Astrophysics.
    White dwarfs, brown dwarfs, cataclysmic variables. Star formation and protostellar systems, stellar astrobiology, binary and multiple systems of stars, stellar evolution and structure, coronas. Central stars of planetary nebulae. Helioseismology, solar neutrinos, production and detection of gravitational radiation from stellar systems.

The expertise of the current Editorial Board is concentrated in the area of (2), and a bit of (5), but we would really like to add some editors from different areas (i.e. 1, 3, 4 and 6).  We  would therefore really appreciate volunteers from other areas of astrophysics (especially stars/exoplanets, etc). If you’re interested please let me know. Please also circulate this call as widely as possible among your colleagues so we can recruit the necessary expertise. The journal is entirely free (both to publish in and to read) and we can’t afford to pay a fee, but there is of course the prestige of being in at the start of a publishing revolution of cosmic proportions!

If you join the Editorial Board we will invite you to an online training session to show you how the platform works.

Thank you in advance for your interest in this project, and I look forward to hearing from you.

 

 

 

The Open Journal of Astrophysics – Update

Posted in Maynooth, Open Access with tags , , , on September 13, 2018 by telescoper

The observant among you will have noticed that the website for the Open Journal of Astrophysics is currently offline. This emphatically does not mean that this project is dead so

In fact we’re in the process of moving the journal to a new platform (at the same web address) and the new site will be up and running as soon as we have completed the transfer, have tested the new configuration and done a few administrative things. All papers already published on the old site will be transferred to the new one and their DOI will remain unchanged. In fact the old site is still available, but at a secret location.

I’ll be blogging in a bit more detail about the new-look Open Journal of Astrophysics in due course, but in the mean time I’ll just make a few points.

First and foremost, if you don’t know what this project is about it is an idea I first floated over five years ago, shortly before I moved to Sussex. Although we got a website together and published a few papers, for one reason or another I didn’t have time to iron out some remaining bugs and the project stalled. However, after my move to Maynooth University I’ve been delighted to receive the support of the Maynooth University Library team and we’re now moving ahead. I know there have been a few false dawns on this project – for which I apologize – so I won’t announce the full re-opening until I’m absolutely sure everything works.

Second, and actually most importantly, the Editorial Board for the Open Journal of Astrophysics is looking for new members. We already have several distinguished editors, but the expertise we currently have is concentrated (not surprisingly) in cosmology, and we would really appreciate volunteers from other areas of astrophysics (especially stars/exoplanets, etc). If you’re interested please let me know.

Third, although the platform will look a little different (i.e. better) the overall philosophy of the Open Journal will remain as it always was, a fully `Green’ Open Access Journal, as defined by the following points:

  • There will be no charge for accessing or downloading OJA papers (i.e. no subscription fee).
  • There will be no charge for submitting, reviewing or publishing OJA papers (i.e. no `article processing charge’).
  • The OJA is a peer-reviewed journal; all papers accepted for publication will be assigned a DOI and registered with Crossref for citation tracking purposes.
  • The OJA is an arXiv overlay journal, so paper submitted to it must first be submitted to the arXiv.

Finally, I will mention that I was motivated to post this update by a piece by George Monbiot in todays’s Guardian. I don’t agree with everything Monbiot says, but he is dead right about this:

In the great majority of cases, the research reported has been funded by taxpayers. Most of the work involved in writing the papers, reviewing and editing them is carried out at public expense by people at universities. Yet this public asset has been captured, packaged and sold back to us for phenomenal fees. Those who pay most are publicly funded libraries. Taxpayers must shell out twice: first for the research, then to see the work they have sponsored. There might be legal justifications for this practice. There are no ethical justifications.

I’ve said as much myself on this blog. My point is that the academic publishing industry is not going to change of its own volition. If the Academic Journal Racket is to be rumbled, it is we (by which I mean academics and our institutions) who have to take control. Sitting on our hands while we get systematically fleeced is not an option. One way to do this is for institutions and organizations to themselves become Open Access publishers, which is precisely what my current institution is doing: Maynooth University will be the official publisher of the Open Journal of Astrophysics (and hopefully many more similar journals in the future).

LIGO and Open Science

Posted in Open Access, Science Politics, The Universe and Stuff with tags , , , , on August 8, 2017 by telescoper

I’ve just come from another meeting here at the Niels Bohr Institute between some members of the LIGO Scientific Collaboration and the authors of the `Danish Paper‘. As with the other one I attended last week it was both interesting and informative. I’m not going to divulge any of the details of the discussion, but I anticipate further developments that will put some of them into the public domain fairly soon and will comment on them as and when that happens.

I think an important aspect of the way science works is that when a given individual or group publishes a result, it should be possible for others to reproduce it (or not as the case may be). In normal-sized laboratory physics it suffices to explain the experimental set-up in the published paper in sufficient detail for another individual or group to build an equivalent replica experiment if they want to check the results. In `Big Science’, e.g. with LIGO or the Large Hadron Collider, it is not practically possible for other groups to build their own copy, so the best that can be done is to release the data coming from the experiment. A basic problem with reproducibility obviously arises when this does not happen.

In astrophysics and cosmology, results in scientific papers are often based on very complicated analyses of large data sets. This is also the case for gravitational wave experiments. Fortunately in astrophysics these days researchers are generally pretty good at sharing their data, but there are a few exceptions in that field. Particle physicists, by contrast, generally treat all their data as proprietary.

Even allowing open access to data doesn’t always solve the reproducibility problem. Often extensive numerical codes are needed to process the measurements and extract meaningful output. Without access to these pipeline codes it is impossible for a third party to check the path from input to output without writing their own version, assuming that there is sufficient information to do that in the first place. That researchers should publish their software as well as their results is quite a controversial suggestion, but I think it’s the best practice for science. In any case there are often intermediate stages between `raw’ data and scientific results, as well as ancillary data products of various kinds. I think these should all be made public. Doing that could well entail a great deal of effort, but I think in the long run that it is worth it.

I’m not saying that scientific collaborations should not have a proprietary period, just that this period should end when a result is announced, and that any such announcement should be accompanied by a release of the data products and software needed to subject the analysis to independent verification.

Now, if you are interested in trying to reproduce the analysis of data from the first detection of gravitational waves by LIGO, you can go here, where you can not only download the data but also find a helpful tutorial on how to analyse it.

This seems at first sight to be fully in the spirit of open science, but if you visit that page you will find this disclaimer:

 

In other words, one can’t check the LIGO data analysis because not all the data and tools necessary to do that are not publicly available.  I know for a fact that this is the case because of the meetings going on here at NBI!

Given that the detection of gravitational waves is one of the most important breakthroughs ever made in physics, I think this is a matter of considerable regret. I also find it difficult to understand the reasoning that led the LIGO consortium to think it was a good plan only to go part of the way towards open science, by releasing only part of the information needed to reproduce the processing of the LIGO signals and their subsequent statistical analysis. There may be good reasons that I know nothing about, but at the moment it seems to me to me to represent a wasted opportunity.

I know I’m an extremist when it comes to open science, and there are probably many who disagree with me, so I thought I’d do a mini-poll on this issue:

Any other comments welcome through the box below!